Ancient genomics

August 31, 2007

Neandertal genome project hits snag

Over the last year, two separate groups of researchers have been trying to sequence the Neandertal genome using DNA from the same fossil. An independent team assessed both group's analyses and announced this week that there were worrying inconsistencies between the two sets of findings. It's possible that at least one of the samples has been contaminated by modern human DNA. PLoS Genetics, Science.

August 27, 2007

Not-quite-suspended animation

How do bacteria survive encased in ice for millions of years? Scientist used to believe the genetic material was essentially frozen in stasis. New studies suggest that in order to stay viable the bacteria must undergo continual DNA repair over the many long years of preservation. PNAS. If life is to be found on Mars or Europa, they suggest, the best place to look will be in ice.

August 12, 2007

Gene popsicles

In the Dry Valleys of the Transantarctic Mountains there are pockets of ice up to 8 million years old. Last week, scientists announced that they resuscitated microbes from this ice. If the microbes are as old as the ice, they were around long before humans split from the chimpanzee/bonobo line, approximately 6 million years ago. The scientists call their sample a "gene popsicle" and speculate that in periods of the Earth's history when ancient ice melted, microbes in samples like theirs might have been reincorporated into current populations--which might be something like dating your great- great- great- to-the-1000th grandmother. They also wonder if the preservation of microbes in icy comets may have seeded planets with genetic material as distant in space as well as time. PNAS, National Geographic.

August 06, 2007

Accidental beauty

The difference between the hulking heads of our Neanderthal cousins and our more graceful selves is merely a matter of chance, say scientists in the Journal of Human Evolution. The difference between our skulls and theirs probably results from genetic drift--meaning that our head shape was not selected by nature or in any sense 'intended' but only accidentally came to be. At least we got the nice skulls... the authors of the study say, "Neandertal and modern human crania may simply represent two outcomes from a vast space of random evolutionary possibilities." Anthropology.net, Science Direct/Journal of Human Evolution.

July 11, 2007

The squid and the mammoth

An almost perfectly preserved baby mammoth has been found in Siberia, and scientists are hailing the discovery as invaluable. Virtually everything about the little beast is intact, even it's eyes remain. I'm not sure how rare it is to unearth prehistoric eyes, or if it has even happened before. The extinct animal may be our best bet so far for harvesting ancient DNA and trying to resurrect long-dead species. Good pictures at BBC, Guardian. In other enormous animal news, on the other side of the world a rare giant squid has washed up on the coast of Tasmania. Its hood is 2 meters long, and its tentacles longer. Scientists are racing to the beach where it lies in order to harvest what samples they can. The squid's photo appears in The Age. The article makes a distinction which is wholly new for me: apparently "giant squid" are merely the smaller relatives of "colossal squid," which can be ten meters long. 

July 09, 2007

Did they or didn't they?

Did Neandertals and humans interbreed? Every couple of years this question cycles through the press, generally instigated by a scientific article presenting new evidence either way. Erik Trinkaus, who compares the bones of ancient humans and Neandertals, is the best known for arguing that they did. Most recently, Spencer Wells of the Genographic Project, told Wired magazine there was no evidence in the human genome that Neandertals and their European human contemporaries produced any children.
Trinkaus in PNAS.

Neandertal Park

Since last year when researchers announced their goal of reconstructing the Neandertal genome, the story has been getting play from many angles in all sorts of publications. In the team's most recent announcement, covered pretty much everywhere by everyone, they explain that the kinds of mistakes they might make trying to read ancient DNA are restricted to a few types. Knowing this should help the scientists avoid them. Part of the solution involves using DNA from many Neandertal individuals.
SciAm, ABCnews,

BOOK



  • A Los Angeles Times Book Prize finalist, The First Word is about the quest for the origins of human language. Although language is a distinctly human gift, it leaves no permanent trace and its evolution has long been a mystery. It is only in the last fifteen years that we have begun to understand how language came into being. The First Word follows two intertwined narratives. The first is an account of how the random and layered processes of evolution wound together to produce a talking animal: us. The second addresses why language evolution was considered a scientific taboo for more than a hundred years and why scientists are at last able to explore the subject.
  • Buy this book (Amazon.com)
  • Buy this book (Amazon.co.uk)
  • Buy this book (Powell's)
  • Buy this book (Barnes & Noble)

REVIEWS

  • from THE JOURNAL OF EVOLUTIONARY PSYCHOLOGY
    "The task she has undertaken... is formidable. Kenneally does it very well."
  • from NEUROLOGY TODAY
    "In addition to its astonishing breadth, this book is up to date, educational, and entertaining."
  • from AMERICAN SCIENTIST
    "...a lucid, readable, comprehensive account."
  • from THE FINANCIAL TIMES
    "[An] admirably serious update on the [language evolution] debate."
  • from THE NEW YORKER
    "[An] accessible account... including many provocative findings."
  • from THE BOSTON GLOBE
    "Kenneally's reporting and interpretation of this research, whose implications for the study of language and human nature are immense, occupy center stage in 'The First Word' and generate real excitement on the page."
  • from THE CHARLOTTE OBSERVER
    "...a cogent and often compelling account... As Kenneally dissects each scholar's theory, a wonderful evolution occurs on the pages: She explains, understatedly, what it means to be part of human nature."
  • from SCIENTIFIC AMERICAN
    "...an elegant exposition."
  • from THE NEW YORK TIMES
    [A] lucid survey of this expanding field... covers an enormous expanse of ground as she brings the reader up to date on developments in a wide variety of disciplines touching on language evolution... explains difficult ideas concisely and clearly... scrupulously fair-minded... zeroes in on a host of fascinating experiments.
  • from THE NEW YORK TIMES BOOK REVIEW
    "[The] scientists who study the origins of language are a passionate, fractious bunch, and you don’t have to be an egghead to be tantalized by the questions that drive their research: how and when did we learn to speak, and to what extent is language a uniquely human attribute?... Much of what [Kenneally] describes is fascinating."

Book list picks

Advance praise

  • Steven Pinker
    "A clear and splendidly written account of a new field of research on a central question about the human species."
  • Steven Johnson
    "'The First Word' is a rare and delightful mix: both a probing exploration of one of the great remaining mysteries of life, and a riveting story of the battles and breakthroughs that drive scientific progress."

CHRISTINE KENNEALLY

  • I am a journalist and author who has written for The New Yorker, The New York Times, Slate and New Scientist, as well as other publications. My book, The First Word: The Search for the Origins of Language, was published in hardback by Viking in 2007. The paperback from Penguin is out now. Before becoming a reporter, I received a Ph.D. in linguistics from Cambridge University and a B.A. (Hons) in English and Linguistics from Melbourne University. I was born and raised in Melbourne, Australia, and have lived in England, Iowa, and Brooklyn, New York (ckenneally at ckenneally dot com).

Slate

New Scientist

Washington Post

The Boston Globe

  • Songs of ourselves:
    We like music that sounds just like us
  • Suicidal tendencies
    High intelligence is often associated with the kind of dramatic unhappiness that leads people to suicide. Think Virginia Woolf, Ernest Hemingway, or the notoriously high suicide rates of doctors.
  • Do they know something we don't?
    Animal senses may help them escape disaster
  • The brain solves problems during sleep
    An avalanche of inspirational literature, audiotapes, videos, and seminars promotes the idea that sleep leads to insight. But until recently the evidence for a connection between the two has been entirely anecdotal.

THE NEW YORKER

The Huffington Post

  • When speciesism is good
    Chimpanzees are smarter than humans. Orangutans are smarter than chimpanzees. Humans are smarter than chimpanzees. Which of these statements is true?
  • Alex
    Alex is dead. The 30-year-old African gray parrot was a resident of Irene Pepperberg's lab at Brandeis University, and for decades Pepperberg taught Alex elements of English.
  • Thank you Rod Stewart. Seriously.
    There's an unexplained mystery about the length of women's lives. Once their ability to have children shuts down, there is no obvious reason for their biology to resist all the forces that conspire to take them down. Indeed, according to demographic models, women over 50 should hit a "wall of death." But they don't. Why not?

Discover

  • AIBO as Research Tool
    When a real animal interacts with an animalbot, it's as though the human in control of the bot has donned a correct scale costume and disguised himself as a bird or a dog or even a bee.

Salon

  • Terrorist wannabes
    In the wake of unimaginable devastation, what motivates someone to phone in a bomb threat?

other articles


  • Other articles can be found at The New York Times, Wired News, Salon and Scientific American.
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